Transcript: ENSDART00000153104.2 msl1b-202

Description

MSL complex subunit 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4491]

Gene Synonyms

fd10h03, si:dkey-245i6.2, wu:fd10h03

Location

Chromosome 12: 27,024,676-27,026,373 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 194 variant alleles and maps to 188 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000090223.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000193531.1	msl1b-204	5303	516aa	ENSDARP00000148779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RMP0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000183881.1	msl1b-203	5135	510aa	ENSDARP00000153193.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QEA0	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000152975.3	msl1b-201	2785	503aa	ENSDARP00000127123.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JA58	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153104.2	msl1b-202	1101	200aa	ENSDARP00000127283.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAL5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,101 bps, Translation length: 200 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153104.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000153104.2 msl1b-202

Summary

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Transcript: ENSDART00000153104.2 msl1b-202

Summary

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