Transcript: ENSDART00000153099.3 eme1-204

Description

essential meiotic structure-specific endonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3191]

Gene Synonyms

fc30c07, wu:fc30c07

Location

Chromosome 12: 21,672,949-21,680,620 reverse strand.

About this transcript

This transcript has 6 exons, is associated with 291 variant alleles and maps to 158 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076913.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112726.5	eme1-201	5172	556aa	ENSDARP00000097532.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6N8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148698.3	eme1-202	2522	556aa	ENSDARP00000123940.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F6N8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153109.2	eme1-205	847	232aa	ENSDARP00000127450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152999.2	eme1-203	825	226aa	ENSDARP00000127132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153099.3	eme1-204	760	86aa	ENSDARP00000127438.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 760 bps, Translation length: 86 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000153099.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000153099.3 eme1-204

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Transcript: ENSDART00000153099.3 eme1-204

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