Transcript: ENSDART00000152974.2 ca10a-203

Description

carbonic anhydrase Xa [Source:ZFIN;Acc:ZDB-GENE-051030-123]

Gene Synonyms

si:ch211-29a20.1, zgc:123167

Location

Chromosome 12: 21,525,496-21,549,147 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 8 domains and features, is associated with 934 variant alleles and maps to 203 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000052644.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000178562.2	ca10a-204	6343	328aa	ENSDARP00000143800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N7X1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000074540.6	ca10a-201	1226	328aa	ENSDARP00000069028.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N7X1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152974.2	ca10a-203	841	235aa	ENSDARP00000127454.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000133188.2	ca10a-202	251	45aa	ENSDARP00000116852.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 841 bps, Translation length: 235 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000152974.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000152974.2 ca10a-203

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Transcript: ENSDART00000152974.2 ca10a-203

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