Transcript: ENSDART00000152972.2 UCN-202

Description

urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]

Location

About this transcript

This transcript has 2 exons, is annotated with 17 domains and features, is associated with 187 variant alleles and maps to 275 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000015095.8	UCN-201	1800	138aa	ENSDARP00000019621.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152972.2	UCN-202	571	132aa	ENSDARP00000127097.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000181873.1	UCN-203	422	138aa	ENSDARP00000149526.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ50	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 571 bps, Translation length: 132 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152972.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.