Transcript: ENSDART00000152964.3 calcoco2-202

Description

calcium binding and coiled-coil domain 2 [Source:ZFIN;Acc:ZDB-GENE-050522-346]

Location

About this transcript

This transcript has 14 exons, is annotated with 15 domains and features, is associated with 853 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152964.3	calcoco2-202	3251	527aa	ENSDARP00000127186.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QGK5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133654.3	calcoco2-201	663	182aa	ENSDARP00000121662.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 13, Transcript length: 3,251 bps, Translation length: 527 residues

Version

ENSDART00000152964.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.