Transcript: ENSDART00000152949.3 katnbl1-203

Description

katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]

Gene Synonyms

fc76b10, si:ch211-150c22.2, wu:fc76b10, zgc:103491

Location

Chromosome 20: 29,209,926-29,213,273 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 2 domains and features, is associated with 179 variant alleles and maps to 110 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042522.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000062350.6	katnbl1-201	1618	305aa	ENSDARP00000062349.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153016.2	katnbl1-204	764	157aa	ENSDARP00000127462.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JB40	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152949.3	katnbl1-203	715	141aa	ENSDARP00000127307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAN9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141252.3	katnbl1-202	645	195aa	ENSDARP00000115799.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TYV2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 715 bps, Translation length: 141 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152949.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152949.3 katnbl1-203

Summary

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Transcript: ENSDART00000152949.3 katnbl1-203

Summary

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