Transcript: ENSDART00000152926.2 bahcc1b-202

Description

BAH domain and coiled-coil containing 1b [Source:ZFIN;Acc:ZDB-GENE-100716-2]

Gene Synonyms

bahcc1, im:7138780, unm_sa874

Location

Chromosome 12: 34,580,544-34,580,988 reverse strand.

About this transcript

This transcript has 2 exons, is annotated with 2 domains and features, is associated with 150 variant alleles and maps to 3 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000080009.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000180807.1	bahcc1b-205	12248	2688aa	ENSDARP00000147391.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAH0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152876.2	bahcc1b-201	10580	2688aa	ENSDARP00000127238.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JAH0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153272.2	bahcc1b-203	708	116aa	ENSDARP00000127445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153418.2	bahcc1b-204	412	57aa	ENSDARP00000127236.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152926.2	bahcc1b-202	127	43aa	ENSDARP00000127200.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 127 bps, Translation length: 43 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152926.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000152926.2 bahcc1b-202

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Transcript: ENSDART00000152926.2 bahcc1b-202

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