Transcript: ENSDART00000152919.2 si:dkey-286j17.4-201

Description

si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]

Location

Chromosome 22: 9,635,294-9,736,050 reverse strand.

About this transcript

This transcript has 39 exons, is annotated with 159 domains and features, is associated with 106 variant alleles and maps to 477 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000093402.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152919.2	si:dkey-286j17.4-201	8110	2579aa	ENSDARP00000127452.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	U3JB30	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190159.1	si:dkey-286j17.4-209	4452	402aa	ENSDARP00000147285.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000181154.1	si:dkey-286j17.4-204	4144	402aa	ENSDARP00000145155.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000180101.1	si:dkey-286j17.4-203	4088	402aa	ENSDARP00000152527.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000191811.1	si:dkey-286j17.4-210	3846	241aa	ENSDARP00000156383.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000185962.1	si:dkey-286j17.4-207	2315	660aa	ENSDARP00000152187.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000184792.1	si:dkey-286j17.4-206	1467	230aa	ENSDARP00000150390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000164721.2	si:dkey-286j17.4-202	1309	232aa	ENSDARP00000132060.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000188282.1	si:dkey-286j17.4-208	968	238aa	ENSDARP00000145177.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000181737.1	si:dkey-286j17.4-205	520	130aa	ENSDARP00000152493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 39, Coding exons: 38, Transcript length: 8,110 bps, Translation length: 2,579 residues

Version

ENSDART00000152919.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000152919.2 si:dkey-286j17.4-201

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Transcript: ENSDART00000152919.2 si:dkey-286j17.4-201

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