Transcript: ENSDART00000152871.2 si:dkey-241l7.4-202

Description

si:dkey-241l7.4 [Source:ZFIN;Acc:ZDB-GENE-041014-238]

Gene Synonyms

zgc:171670

Location

Chromosome 20: 54,024,773-54,025,947 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 19 domains and features, is associated with 15 variant alleles and maps to 116 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089478.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130767.4	si:dkey-241l7.4-201	809	153aa	ENSDARP00000109765.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG16	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152871.2	si:dkey-241l7.4-202	677	153aa	ENSDARP00000127261.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG16	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183562.1	si:dkey-241l7.4-203	566	153aa	ENSDARP00000156653.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RG16	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 677 bps, Translation length: 153 residues

Version

ENSDART00000152871.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152871.2 si:dkey-241l7.4-202

Summary

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Transcript: ENSDART00000152871.2 si:dkey-241l7.4-202

Summary

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