Transcript: ENSDART00000152855.2 prdx1-203

Description

peroxiredoxin 1 [Source:ZFIN;Acc:ZDB-GENE-050320-35]

Gene Synonyms

NKEF-A, hm:zehl0637, zgc:110343

Location

Chromosome 2: 6,107,103-6,112,865 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 241 variant alleles and maps to 214 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058734.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081663.6	prdx1-201	1224	199aa	ENSDARP00000076104.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2AWE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164269.2	prdx1-204	3160	199aa	ENSDARP00000140332.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2AWE1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134921.3	prdx1-202	933	199aa	ENSDARP00000116465.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2AWE1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152855.2	prdx1-203	627	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 627 bps,

Version

ENSDART00000152855.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000152855.2 prdx1-203

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Transcript: ENSDART00000152855.2 prdx1-203

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