Transcript: ENSDART00000152811.3 tdh-206

Description

L-threonine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-040426-2379]

Gene Synonyms

wu:fc11b08, zgc:77667

Location

Chromosome 20: 18,992,690-18,996,164 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 5 domains and features, is associated with 139 variant alleles and maps to 139 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000002745.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000025509.7	tdh-201	2053	375aa	ENSDARP00000024225.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P3J8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147105.3	tdh-203	2116	375aa	ENSDARP00000114681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P3J8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152380.3	tdh-204	966	307aa	ENSDARP00000126584.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GDN1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152811.3	tdh-206	661	196aa	ENSDARP00000126929.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEL6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152778.2	tdh-205	630	151aa	ENSDARP00000127063.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEZ8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132928.3	tdh-202	423	85aa	ENSDARP00000126904.1	Nonsense mediated decay	R4GEJ1	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 661 bps, Translation length: 196 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152811.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152811.3 tdh-206

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Transcript: ENSDART00000152811.3 tdh-206

Summary

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