Transcript: ENSDART00000152793.2 EXOC6-203

Description

exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]

Location

Chromosome 12: 9,049,339-9,087,566 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 1228 variant alleles and maps to 54 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020521.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000125230.3	EXOC6-201	3798	801aa	ENSDARP00000112410.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152793.2	EXOC6-203	805	257aa	ENSDARP00000126777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152733.2	EXOC6-204	354	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
ENSDART00000022163.9	EXOC6-202	3767	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
ENSDART00000152630.2	EXOC6-205	865	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 805 bps, Translation length: 257 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152793.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152793.2 EXOC6-203

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000152793.2 EXOC6-203

Summary

About Us

Get help

Our sister sites

Follow us