Transcript: ENSDART00000152729.2 PICALM-201

Description

phosphatidylinositol binding clathrin assembly protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6795]

Location

Chromosome 15: 19,747,644-19,772,372 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 10 domains and features, is associated with 353 variant alleles and maps to 140 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014137.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000175502.2	PICALM-205	5105	646aa	ENSDARP00000144339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000159475.2	PICALM-206	4903	590aa	ENSDARP00000131752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXI5	-
ENSDART00000152729.2	PICALM-201	1634	414aa	ENSDARP00000126689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159294.2	PICALM-202	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152339.2	PICALM-204	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152544.2	PICALM-203	161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,634 bps, Translation length: 414 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152729.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152729.2 PICALM-201

Summary

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Transcript: ENSDART00000152729.2 PICALM-201

Summary

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