Transcript: ENSDART00000152729.2 picalmb-203

Description

phosphatidylinositol binding clathrin assembly protein b [Source:ZFIN;Acc:ZDB-GENE-030131-6795]

Gene Synonyms

fa01d03, picalm, picalml, wu:fa01d03, wu:fa05d03, wu:fb69g01, wu:fe17e02, zgc:91993

Location

Chromosome 15: 19,747,644-19,772,372 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 11 domains and features, is associated with 353 variant alleles and maps to 101 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000014137.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000175502.2	picalmb-206	5105	646aa	ENSDARP00000144339.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YAZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000159475.2	picalmb-205	4903	590aa	ENSDARP00000131752.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6AXI5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000152729.2	picalmb-203	1634	414aa	ENSDARP00000126689.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GDY1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000159294.2	picalmb-204	627	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152339.2	picalmb-201	537	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000152544.2	picalmb-202	161	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 12, Coding exons: 12, Transcript length: 1,634 bps, Translation length: 414 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152729.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152729.2 picalmb-203

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Transcript: ENSDART00000152729.2 picalmb-203

Summary

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