Transcript: ENSDART00000152692.2 nid2b-203

Description

nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]

Gene Synonyms

si:ch211-13n20.2, si:dkey-29m11.1

Location

About this transcript

This transcript has 6 exons, is associated with 362 variant alleles and maps to 53 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134097.4	nid2b-202	3546	1155aa	ENSDARP00000119933.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RI93	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000023809.9	nid2b-201	2570	506aa	ENSDARP00000019482.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9A6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152692.2	nid2b-203	768	70aa	ENSDARP00000126978.1	Nonsense mediated decay	R4GER5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 768 bps, Translation length: 70 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000152692.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.