Transcript: ENSDART00000152650.2 si:dkey-1c7.1-202

Description

si:dkey-1c7.1 [Source:ZFIN;Acc:ZDB-GENE-121214-246]

Location

Chromosome 1: 57,757,456-57,763,348 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 246 variant alleles and maps to 83 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074334.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000152650.2	si:dkey-1c7.1-202	1480	268aa	ENSDARP00000127077.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000112472.4	si:dkey-1c7.1-201	777	258aa	ENSDARP00000101238.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000187223.1	si:dkey-1c7.1-205	763	183aa	ENSDARP00000147954.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000169976.2	si:dkey-1c7.1-203	624	185aa	ENSDARP00000135425.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000181754.1	si:dkey-1c7.1-204	612	188aa	ENSDARP00000152688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 11, Coding exons: 6, Transcript length: 1,480 bps, Translation length: 268 residues

Version

ENSDART00000152650.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152650.2 si:dkey-1c7.1-202

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000152650.2 si:dkey-1c7.1-202

Summary

About Us

Get help

Our sister sites

Follow us