Transcript: ENSDART00000152636.3 clocka-202

Description

clock circadian regulator a [Source:ZFIN;Acc:ZDB-GENE-990630-14]

Gene Synonyms

Clock1a, clk1, clock, zCLOCK1, zfCLOCK1

Location

About this transcript

This transcript has 24 exons, is annotated with 45 domains and features, is associated with 2483 variant alleles and maps to 210 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152636.3	clocka-202	6535	892aa	ENSDARP00000126787.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RIV1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000025575.12	clocka-201	3424	892aa	ENSDARP00000014377.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RIV1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 24, Coding exons: 20, Transcript length: 6,535 bps, Translation length: 892 residues

Version

ENSDART00000152636.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.