Transcript: ENSDART00000152622.3 NOC3L-203

Description

NOC3-like DNA replication regulator [Source:ZFIN;Acc:ZDB-GENE-030131-9878]

Location

About this transcript

This transcript has 21 exons, is associated with 427 variant alleles and maps to 222 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000028043.9	NOC3L-201	2569	800aa	ENSDARP00000004350.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DRN3-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152622.3	NOC3L-203	2565	702aa	ENSDARP00000127021.1	Nonsense mediated decay	-	-
ENSDART00000123511.3	NOC3L-202	603	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 21, Coding exons: 19, Transcript length: 2,565 bps, Translation length: 702 residues

Version

ENSDART00000152622.3

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.