Transcript: ENSDART00000152616.2 PRKG1-202

Description

protein kinase cGMP-dependent 1b [Source:ZFIN;Acc:ZDB-GENE-080225-40]

Location

About this transcript

This transcript has 3 exons, is associated with 182 variant alleles and maps to 23 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000179759.1	PRKG1-204	2055	684aa	ENSDARP00000149592.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8R8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000152765.2	PRKG1-201	2072	432aa	ENSDARP00000126641.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000043236.7	PRKG1-203	2010	669aa	ENSDARP00000043235.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R125	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186420.1	PRKG1-205	1923	640aa	ENSDARP00000146350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152616.2	PRKG1-202	942	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 942 bps,

Version

ENSDART00000152616.2

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.