Transcript: ENSDART00000152590.2 PELI1-201

Description

pellino E3 ubiquitin protein ligase 1a [Source:ZFIN;Acc:ZDB-GENE-110310-6]

Location

About this transcript

This transcript has 5 exons, is annotated with 1 domain and feature, is associated with 409 variant alleles and maps to 49 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152143.3	PELI1-202	2160	442aa	ENSDARP00000126803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M2B719	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000187293.1	PELI1-203	5765	439aa	ENSDARP00000153586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000152590.2	PELI1-201	592	113aa	ENSDARP00000126828.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 592 bps, Translation length: 113 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152590.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.