Transcript: ENSDART00000152560.3 si:zfos-2330d3.7-201

Description

si:zfos-2330d3.7 [Source:ZFIN;Acc:ZDB-GENE-121214-112]

Location

About this transcript

This transcript has 6 exons, is annotated with 11 domains and features, is associated with 296 variant alleles and maps to 47 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152560.3	si:zfos-2330d3.7-201	1112	243aa	ENSDARP00000126970.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEQ7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171552.2	si:zfos-2330d3.7-202	732	243aa	ENSDARP00000133350.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEQ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 1,112 bps, Translation length: 243 residues

Version

ENSDART00000152560.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.