Transcript: ENSDART00000152490.3 nlrc11-202

Description

NLR family, CARD domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-121214-30]

Gene Synonyms

Gene26712, Gene26713, nlrc3l, si:ch211-181d7.3

Location

About this transcript

This transcript has 9 exons, is annotated with 25 domains and features, is associated with 140 variant alleles and maps to 103 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152490.3	nlrc11-202	6436	966aa	ENSDARP00000126823.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA88	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180426.1	nlrc11-203	4638	761aa	ENSDARP00000156818.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000099313.5	nlrc11-201	3088	966aa	ENSDARP00000090086.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FA88	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 6,436 bps, Translation length: 966 residues

Version

ENSDART00000152490.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.