Transcript: ENSDART00000152482.3 pagr1-202

Description

PAXIP1 associated glutamate-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4801]

Gene Synonyms

c16orf53, wu:fd61a05

Location

Chromosome 12: 3,723,651-3,731,978 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 19 domains and features, is associated with 358 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000076966.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108771.4	pagr1-201	1119	273aa	ENSDARP00000104234.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1D2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152482.3	pagr1-202	1241	273aa	ENSDARP00000126936.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1D2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179922.1	pagr1-203	1202	273aa	ENSDARP00000145086.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F1D2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 1,241 bps, Translation length: 273 residues

Version

ENSDART00000152482.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000152482.3 pagr1-202

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Transcript: ENSDART00000152482.3 pagr1-202

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