Transcript: ENSDART00000152469.2 rac1l-202

Description

Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]

Gene Synonyms

Rac1b

Location

Chromosome 1: 57,128,613-57,129,299 reverse strand.

About this transcript

This transcript has 1 exon, is annotated with 18 domains and features, is associated with 118 variant alleles and maps to 62 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000096549.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152469.2	rac1l-202	687	229aa	ENSDARP00000126951.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEN8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000157226.3	rac1l-203	618	205aa	ENSDARP00000129220.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WG65	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 1, Coding exons: 1, Transcript length: 687 bps, Translation length: 229 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152469.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152469.2 rac1l-202

Summary

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Transcript: ENSDART00000152469.2 rac1l-202

Summary

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