Transcript: ENSDART00000152447.3 trpm4b3-202

Description

transient receptor potential melastatin 4b3 [Source:ZFIN;Acc:ZDB-GENE-041008-189]

Location

About this transcript

This transcript has 9 exons, is annotated with 24 domains and features, is associated with 58 variant alleles and maps to 31 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000159007.2	trpm4b3-203	3680	1225aa	ENSDARP00000140015.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	S5TZ97	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152314.2	trpm4b3-201	1307	435aa	ENSDARP00000126648.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000152447.3	trpm4b3-202	1252	417aa	ENSDARP00000127011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 1,252 bps, Translation length: 417 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152447.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.