Transcript: ENSDART00000152418.3 C20H12orf57-202

Description

gene rich cluster, C10 gene [Source:ZFIN;Acc:ZDB-GENE-030131-2279]

Location

About this transcript

This transcript has 4 exons, is annotated with 7 domains and features, is associated with 207 variant alleles and maps to 193 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000044125.7	C20H12orf57-201	1206	122aa	ENSDARP00000044124.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TH01	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152418.3	C20H12orf57-202	948	122aa	ENSDARP00000126596.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6TH01	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152668.2	C20H12orf57-203	877	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 948 bps, Translation length: 122 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6TH01

Version

ENSDART00000152418.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.