Transcript: ENSDART00000152397.3 irf9-202

Description

interferon regulatory factor 9 [Source:ZFIN;Acc:ZDB-GENE-040912-165]

Gene Synonyms

isgf3g, zgc:92097

Location

About this transcript

This transcript has 5 exons, is annotated with 15 domains and features, is associated with 252 variant alleles and maps to 55 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137757.3	irf9-201	1767	428aa	ENSDARP00000123550.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q573	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152397.3	irf9-202	538	167aa	ENSDARP00000126686.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GDX9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152751.3	irf9-203	614	75aa	ENSDARP00000127044.1	Nonsense mediated decay	R4GEY0	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 538 bps, Translation length: 167 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152397.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.