Transcript: ENSDART00000152321.2 TMEM200A-201

Description

transmembrane protein 200A [Source:ZFIN;Acc:ZDB-GENE-040724-81]

Location

About this transcript

This transcript has 2 exons, is annotated with 18 domains and features, is associated with 590 variant alleles and maps to 149 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152321.2	TMEM200A-201	2158	497aa	ENSDARP00000126735.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZV39 Q5RGQ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000041250.5	TMEM200A-202	1586	497aa	ENSDARP00000041249.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7ZV39 Q5RGQ8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 1, Transcript length: 2,158 bps, Translation length: 497 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5RGQ8

Version

ENSDART00000152321.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.