Transcript: ENSDART00000152289.3 ATG4D-201

Description

autophagy related 4D, cysteine peptidase a [Source:ZFIN;Acc:ZDB-GENE-041111-102]

Location

About this transcript

This transcript has 11 exons, is annotated with 6 domains and features, is associated with 492 variant alleles and maps to 108 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152289.3	ATG4D-201	4671	485aa	ENSDARP00000126975.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9Q0Z1 R4GER2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000063936.5	ATG4D-202	1392	463aa	ENSDARP00000063935.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 11, Coding exons: 10, Transcript length: 4,671 bps, Translation length: 485 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: R4GER2

Version

ENSDART00000152289.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.