Transcript: ENSDART00000152212.3 smarcd2-202

Description

SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2 [Source:ZFIN;Acc:ZDB-GENE-080215-1]

Location

About this transcript

This transcript has 5 exons, is associated with 456 variant alleles and maps to 33 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000127343.3	smarcd2-201	3116	501aa	ENSDARP00000104597.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYW7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152212.3	smarcd2-202	724	57aa	ENSDARP00000127084.1	Nonsense mediated decay	R4GF19	-

Summary

Statistics

Exons: 5, Coding exons: 2, Transcript length: 724 bps, Translation length: 57 residues

Version

ENSDART00000152212.3

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.