Transcript: ENSDART00000152154.3 ctslb-204

Description

cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]

Gene Synonyms

catL, cathepsin L, cb15, cstlb, ctsl, ctsl1b, hatching gland 1, hgg1, wu:fb30g09

Location

Chromosome 12: 16,717,868-16,720,434 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 16 domains and features, is associated with 2 variant alleles and maps to 348 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087651.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000187639.1	ctslb-206	1249	336aa	ENSDARP00000148966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q790	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000152154.3	ctslb-204	1348	335aa	ENSDARP00000126964.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A7MCM3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000152261.2	ctslb-205	308	66aa	ENSDARP00000127058.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEZ3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 1,348 bps, Translation length: 335 residues

Version

ENSDART00000152154.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152154.3 ctslb-204

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000152154.3 ctslb-204

Summary

About Us

Get help

Our sister sites

Follow us