Transcript: ENSDART00000152131.2 si:dkey-27j5.10-205

Description

si:dkey-27j5.10 [Source:ZFIN;Acc:ZDB-GENE-121214-151]

Location

About this transcript

This transcript has 5 exons, is annotated with 23 domains and features, is associated with 79 variant alleles and maps to 57 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146799.3	si:dkey-27j5.10-204	918	305aa	ENSDARP00000120612.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QBB8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000152131.2	si:dkey-27j5.10-205	909	303aa	ENSDARP00000126931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GEL8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 909 bps, Translation length: 303 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152131.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.