Transcript: ENSDART00000152096.3 STRA6-202

Description

signaling receptor and transporter of retinol STRA6 [Source:ZFIN;Acc:ZDB-GENE-060616-252]

Location

Chromosome 25: 22,572,296-22,634,198 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 40 domains and features, is associated with 861 variant alleles and maps to 176 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000051874.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000067479.6	STRA6-201	2888	670aa	ENSDARP00000067478.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PGX1 F1RAX4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000161559.2	STRA6-204	2972	670aa	ENSDARP00000131530.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PGX1 F1RAX4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152096.3	STRA6-202	2290	670aa	ENSDARP00000126450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PGX1 F1RAX4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000127831.3	STRA6-203	523	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 18, Coding exons: 17, Transcript length: 2,290 bps, Translation length: 670 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1RAX4

Version

ENSDART00000152096.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152096.3 STRA6-202

Summary

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Transcript: ENSDART00000152096.3 STRA6-202

Summary

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