Transcript: ENSDART00000152056.2 PAX9-201

Description

paired box 9 [Source:ZFIN;Acc:ZDB-GENE-980526-399]

Location

About this transcript

This transcript has 3 exons, is associated with 1008 variant alleles and maps to 60 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000075936.7	PAX9-202	1903	343aa	ENSDARP00000070415.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q98865	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000075932.6	PAX9-203	1763	270aa	ENSDARP00000070411.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q98866	-
ENSDART00000152056.2	PAX9-201	759	15aa	ENSDARP00000126510.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 1, Transcript length: 759 bps, Translation length: 15 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000152056.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.