Transcript: ENSDART00000152030.2 macf1a-204

Description

microtubule actin crosslinking factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3606]

Gene Synonyms

acf7a, fc46g01, macf1, magellan, mgn, si:rp71-45k5.7, wu:fc46g01

Location

Chromosome 19: 35,040,991-35,052,451 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 267 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000028533.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000146394.4	macf1a-202	18608	5754aa	ENSDARP00000116989.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA35	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000054274.6	macf1a-201	16194	5397aa	ENSDARP00000054273.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFS3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000152030.2	macf1a-204	898	214aa	ENSDARP00000126390.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DY63	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151924.2	macf1a-203	684	228aa	ENSDARP00000126497.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYG8	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 898 bps, Translation length: 214 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000152030.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000152030.2 macf1a-204

Summary

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Transcript: ENSDART00000152030.2 macf1a-204

Summary

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