Transcript: ENSDART00000152026.2 slco5a1a-202

Description

solute carrier organic anion transporter family member 5A1a [Source:ZFIN;Acc:ZDB-GENE-090316-1]

Location

About this transcript

This transcript has 10 exons, is annotated with 58 domains and features, is associated with 1286 variant alleles and maps to 143 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152026.2	slco5a1a-202	4185	859aa	ENSDARP00000126538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180193.1	slco5a1a-203	1357	318aa	ENSDARP00000149343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151923.2	slco5a1a-201	968	190aa	ENSDARP00000126398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 4,185 bps, Translation length: 859 residues

Version

ENSDART00000152026.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.