Transcript: ENSDART00000152007.3 si:dkey-11m19.5-202

Description

si:dkey-11m19.5 [Source:ZFIN;Acc:ZDB-GENE-120709-97]

Location

Chromosome 11: 12,897,004-12,925,696 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 34 domains and features, is associated with 530 variant alleles and maps to 179 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000058416.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000182515.1	si:dkey-11m19.5-203	13908	4344aa	ENSDARP00000146298.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R672	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081296.5	si:dkey-11m19.5-201	13810	4344aa	ENSDARP00000075739.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R672	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152007.3	si:dkey-11m19.5-202	8010	2670aa	ENSDARP00000126534.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYK5	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 8,010 bps, Translation length: 2,670 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000152007.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

Transcript: ENSDART00000152007.3 si:dkey-11m19.5-202

Summary

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Transcript: ENSDART00000152007.3 si:dkey-11m19.5-202

Summary

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