Transcript: ENSDART00000151952.3 si:dkey-59l11.10-202

Description

si:dkey-59l11.10 [Source:ZFIN;Acc:ZDB-GENE-120703-17]

Location

Chromosome 4: 38,818,194-38,828,508 reverse strand.

About this transcript

This transcript has 9 exons, is annotated with 44 domains and features, is associated with 48 variant alleles and maps to 1012 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000034095.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151952.3	si:dkey-59l11.10-202	3708	1110aa	ENSDARP00000126335.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000169969.2	si:dkey-59l11.10-203	3087	1028aa	ENSDARP00000135853.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMZ0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151932.2	si:dkey-59l11.10-201	645	198aa	ENSDARP00000126458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 3,708 bps, Translation length: 1,110 residues

Version

ENSDART00000151952.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151952.3 si:dkey-59l11.10-202

Summary

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Transcript: ENSDART00000151952.3 si:dkey-59l11.10-202

Summary

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