Transcript: ENSDART00000151929.3 slc8a1b-202

Description

solute carrier family 8 member 1b [Source:ZFIN;Acc:ZDB-GENE-060110-3]

Gene Synonyms

ncx1b, ncx1n

Location

About this transcript

This transcript has 7 exons, is annotated with 68 domains and features, is associated with 5338 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000128875.4	slc8a1b-201	2835	944aa	ENSDARP00000109925.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q32SG7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000151929.3	slc8a1b-202	4238	942aa	ENSDARP00000126373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CZC2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162670.3	slc8a1b-203	2955	942aa	ENSDARP00000136905.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2CZC2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 4,238 bps, Translation length: 942 residues

Version

ENSDART00000151929.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.