Transcript: ENSDART00000151923.2 slco5a1a-201

Description

solute carrier organic anion transporter family member 5A1a [Source:ZFIN;Acc:ZDB-GENE-090316-1]

Gene Synonyms

Oatp5a1, Oatp5a2, slco5a1

Location

About this transcript

This transcript has 2 exons, is annotated with 9 domains and features, is associated with 120 variant alleles and maps to 22 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152026.2	slco5a1a-202	4185	859aa	ENSDARP00000126538.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2I7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180193.1	slco5a1a-203	1357	318aa	ENSDARP00000149343.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q892	-
ENSDART00000151923.2	slco5a1a-201	968	190aa	ENSDARP00000126398.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DY70	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 968 bps, Translation length: 190 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151923.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.