Transcript: ENSDART00000151865.3 nlrc5-202

Description

NLR family, CARD domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080429-2]

Location

Chromosome 18: 17,624,295-17,657,801 forward strand.

About this transcript

This transcript has 44 exons, is annotated with 45 domains and features, is associated with 722 variant alleles and maps to 177 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000024631.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151865.3	nlrc5-202	6425	1746aa	ENSDARP00000126444.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	K7DYB6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000190408.1	nlrc5-205	6585	991aa	ENSDARP00000145244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000033762.9	nlrc5-201	6341	1718aa	ENSDARP00000035227.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000189204.1	nlrc5-204	6341	1718aa	ENSDARP00000146586.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8RJK5	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000188894.1	nlrc5-203	6173	1662aa	ENSDARP00000153101.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193471.1	nlrc5-206	5984	1599aa	ENSDARP00000147191.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 44, Coding exons: 43, Transcript length: 6,425 bps, Translation length: 1,746 residues

Version

ENSDART00000151865.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000151865.3 nlrc5-202

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Transcript: ENSDART00000151865.3 nlrc5-202

Summary

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