Transcript: ENSDART00000151856.2 nlrp1-201

Description

NLR family pyrin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120709-59]

Gene Synonyms

nlrp6(2of5), si:ch211-66k16.28

Location

About this transcript

This transcript has 8 exons, is annotated with 25 domains and features, is associated with 425 variant alleles and maps to 141 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000151856.2	nlrp1-201	3934	1192aa	ENSDARP00000126513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000183490.1	nlrp1-202	231	76aa	ENSDARP00000145072.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 3,934 bps, Translation length: 1,192 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151856.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.