Transcript: ENSDART00000151829.2 RPS6KA1-202

Description

ribosomal protein S6 kinase a, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060929-516]

Location

Chromosome 17: 27,158,706-27,163,356 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 455 variant alleles and maps to 149 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000033437.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184864.1	RPS6KA1-205	6335	764aa	ENSDARP00000151674.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000178734.2	RPS6KA1-207	6251	736aa	ENSDARP00000144319.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000129273.4	RPS6KA1-204	5367	755aa	ENSDARP00000104901.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000044378.10	RPS6KA1-201	3402	758aa	ENSDARP00000044377.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000193345.1	RPS6KA1-206	1979	310aa	ENSDARP00000147972.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08CV8	-
ENSDART00000151829.2	RPS6KA1-202	560	187aa	ENSDARP00000126449.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151901.3	RPS6KA1-203	486	162aa	ENSDARP00000126409.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 560 bps, Translation length: 187 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000151829.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151829.2 RPS6KA1-202

Summary

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Transcript: ENSDART00000151829.2 RPS6KA1-202

Summary

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