Transcript: ENSDART00000151821.3 U2AF2-205

Description

U2 small nuclear RNA auxiliary factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1881]

Location

Chromosome 19: 10,306,862-10,323,969 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 303 variant alleles and maps to 60 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000011740.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000023571.9	U2AF2-202	2665	475aa	ENSDARP00000023679.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P022	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171795.2	U2AF2-208	2200	480aa	ENSDARP00000137574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IMP0	-
ENSDART00000151684.2	U2AF2-203	890	243aa	ENSDARP00000126011.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151162.3	U2AF2-206	858	145aa	ENSDARP00000126234.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151259.3	U2AF2-204	836	269aa	ENSDARP00000126171.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151821.3	U2AF2-205	824	223aa	ENSDARP00000126178.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151352.2	U2AF2-207	735	123aa	ENSDARP00000125902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151121.2	U2AF2-201	789	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 824 bps, Translation length: 223 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151821.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000151821.3 U2AF2-205

Summary

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Transcript: ENSDART00000151821.3 U2AF2-205

Summary

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