Transcript: ENSDART00000151819.2 yipf2-204

Description

Yip1 domain family, member 2 [Source:ZFIN;Acc:ZDB-GENE-040724-124]

Gene Synonyms

si:dkey-204f11.62, zgc:91967

Location

About this transcript

This transcript has 7 exons, is annotated with 10 domains and features, is associated with 210 variant alleles and maps to 101 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003133.10	yipf2-201	1622	304aa	ENSDARP00000025309.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DBU9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151819.2	yipf2-204	743	188aa	ENSDARP00000126287.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3ITL6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000151555.2	yipf2-202	548	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000151676.2	yipf2-203	523	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 743 bps, Translation length: 188 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151819.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.