Transcript: ENSDART00000151750.2 vdrb-203

Description

vitamin D receptor b [Source:ZFIN;Acc:ZDB-GENE-080403-10]

Gene Synonyms

NR1I1-B, gb:dq017633, nr1i1b

Location

About this transcript

This transcript has 3 exons, is annotated with 12 domains and features, is associated with 390 variant alleles and maps to 33 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000150885.3	vdrb-202	2033	422aa	ENSDARP00000125655.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L673	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000104116.6	vdrb-201	1364	422aa	ENSDARP00000094891.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L673	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151750.2	vdrb-203	371	92aa	ENSDARP00000126141.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 371 bps, Translation length: 92 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000151750.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.