Transcript: ENSDART00000151737.4 pkhd1l1.2-204

Description

PKHD1 like 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-789]

Gene Synonyms

si:ch211-244a23.1

Location

About this transcript

This transcript has 77 exons, is annotated with 114 domains and features, is associated with 844 variant alleles and maps to 268 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151737.4	pkhd1l1.2-204	12939	4198aa	ENSDARP00000125726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000124987.3	pkhd1l1.2-202	12552	4183aa	ENSDARP00000105859.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000050456.10	pkhd1l1.2-201	11920	3895aa	ENSDARP00000050455.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8E7R5	-
ENSDART00000138809.2	pkhd1l1.2-203	759	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 77, Coding exons: 76, Transcript length: 12,939 bps, Translation length: 4,198 residues

Version

ENSDART00000151737.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.