Transcript: ENSDART00000151680.2 lrrc69-203

Description

leucine rich repeat containing 69 [Source:ZFIN;Acc:ZDB-GENE-120215-213]

Gene Synonyms

si:ch73-302o18.2

Location

About this transcript

This transcript has 6 exons, is associated with 232 variant alleles and maps to 35 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130984.4	lrrc69-201	1091	345aa	ENSDARP00000110106.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FCW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151680.2	lrrc69-203	591	160aa	ENSDARP00000126024.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151526.2	lrrc69-202	542	69aa	ENSDARP00000125670.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 591 bps, Translation length: 160 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151680.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.