Transcript: ENSDART00000151641.2 zgc:173742-202

Description

zgc:173742 [Source:ZFIN;Acc:ZDB-GENE-030131-6489]

Location

About this transcript

This transcript has 4 exons, is annotated with 12 domains and features, is associated with 5 variant alleles and maps to 129 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000006628.10	zgc:173742-201	1941	646aa	ENSDARP00000009334.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186558.1	zgc:173742-203	1449	482aa	ENSDARP00000152445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000151641.2	zgc:173742-202	673	158aa	ENSDARP00000125627.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 673 bps, Translation length: 158 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000151641.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.