Transcript: ENSDART00000151634.3 tnrc6c1-202

Description

trinucleotide repeat containing adaptor 6C1 [Source:ZFIN;Acc:ZDB-GENE-030131-7440]

Gene Synonyms

fj17e06, si:dkey-54k13.1, unm_sa1472, wu:fj17e06

Location

About this transcript

This transcript has 22 exons, is annotated with 76 domains and features, is associated with 1128 variant alleles and maps to 228 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151634.3	tnrc6c1-202	12420	1817aa	ENSDARP00000125624.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IRW6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000181485.1	tnrc6c1-203	5034	1677aa	ENSDARP00000149733.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000113726.4	tnrc6c1-201	5028	1675aa	ENSDARP00000099922.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183255.1	tnrc6c1-204	4620	1539aa	ENSDARP00000149934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 22, Coding exons: 21, Transcript length: 12,420 bps, Translation length: 1,817 residues

Version

ENSDART00000151634.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.