Transcript: ENSDART00000151625.3 si:ch211-157c3.4-203

Description

si:ch211-157c3.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8454]

Location

Chromosome 3: 27,642,386-27,647,845 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 11 domains and features, is associated with 12 variant alleles and maps to 251 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000087093.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151625.3	si:ch211-157c3.4-203	1776	149aa	ENSDARP00000126137.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151027.3	si:ch211-157c3.4-202	1127	149aa	ENSDARP00000126144.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122031.3	si:ch211-157c3.4-201	754	149aa	ENSDARP00000109985.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FAA1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151675.3	si:ch211-157c3.4-204	782	56aa	ENSDARP00000125685.1	Nonsense mediated decay	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,776 bps, Translation length: 149 residues

Version

ENSDART00000151625.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000151625.3 si:ch211-157c3.4-203

Summary

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Transcript: ENSDART00000151625.3 si:ch211-157c3.4-203

Summary

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